Transcript: lnc-PON3-2:5

Basic information

LNCipedia transcript ID: lnc-PON3-2:5 
LNCipedia gene ID: lnc-PON3-2
Location (hg19): chr7:95041636-95064263
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 555 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT122072
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
LVAVGLLGIALALLGER 100% sense-1
Lee translation initiation sites 0 non-coding 
PhyloCSF score 141.11 coding 
CPAT coding probability 2.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PON3-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PON3-2:5
4.0 lnc-PON3-2:5
4.1 lnc-PON3-2:5
5.0 lnc-PON3-2:5
5.1 lnc-PEX1-46:5
5.2 lnc-PON3-2:5