Transcript: lnc-POTEB-5:3

Basic information

LNCipedia transcript ID: lnc-POTEB-5:3 
LNCipedia gene ID: lnc-POTEB-5
Location (hg19): chr15:22541569-22544337
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1928 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00024033
Alternative gene names: XLOC_011397; linc-POTEB-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.8168 non-coding 
CPAT coding probability 4.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POTEB-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POTEB-4:3
3.1 lnc-POTEB-5:3
4.0 lnc-POTEB-5:3
4.1 lnc-POTEB-5:3
5.0 lnc-POTEB-5:3
5.1 lnc-ATP10A-36:5
5.2 lnc-POTEB-5:3