Transcript: lnc-POTEF-6:4

Basic information

LNCipedia transcript ID: lnc-POTEF-6:4 
LNCipedia gene ID: lnc-POTEF-6
Location (hg19): chr2:130783572-130808704
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4524 bp
Exons: 12
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT074262; NR_026758
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 31.7243 non-coding 
CPAT coding probability 16.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POTEF-6:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POTEF-6:4
4.0 lnc-POTEF-6:4
4.1 lnc-POTEF-6:4
5.0 lnc-POTEF-6:4
5.1 lnc-CCDC115-7:5
5.2 lnc-POTEF-6:4