Transcript: lnc-POTEG-23:3

Basic information

LNCipedia transcript ID: lnc-POTEG-23:3 
LNCipedia gene ID: lnc-POTEG-23
Location (hg19): chr14:19740033-19742744
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2712 bp
Exons: 1
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000551932; ENST00000551932.1; RP11-496I2.2-001; OTTHUMT00000409117.1; NONHSAT035492
Alternative gene names: ENSG00000257310; RP11-496I2.2; ENSG00000257310.1; OTTHUMG00000170433.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.1813 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POTEG-23:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POTEM-4:1
3.1 lnc-POTEM-5:1
4.0 lnc-POTEM-5:1
4.1 lnc-POTEM-5:1
5.0 lnc-POTEM-5:1
5.1 lnc-TEP1-23:3
5.2 lnc-POTEG-23:3