Transcript: lnc-POTEG-6:1

Basic information

LNCipedia transcript ID: lnc-POTEG-6:1 
LNCipedia gene ID: lnc-POTEG-6
Location (hg19): chr14:19687688-19887497
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 263 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000550717.1; RP11-496I2.3-001; OTTHUMT00000409114.1; NONHSAT035491
Alternative gene names: ENSG00000257898.1; RP11-496I2.3; OTTHUMG00000170501.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POTEG-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POTEM-6:1
4.0 lnc-POTEM-6:1
4.1 lnc-POTEM-6:1
5.0 lnc-POTEM-6:1
5.1 lnc-TEP1-24:1
5.2 lnc-POTEG-6:1