Transcript: lnc-POTEG-7:4

Basic information

LNCipedia transcript ID: lnc-POTEG-7:4 
LNCipedia gene ID: lnc-POTEG-7
Location (hg19): chr14:19670792-19681014
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 723 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000413661; ENST00000413661.1; AL589743.2-002; OTTHUMT00000317894.1
Alternative gene names: ENSG00000228294; AL589743.2; ENSG00000228294.2; OTTHUMG00000150377.2; BMS1P17


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.4269 non-coding 
CPAT coding probability 2.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POTEG-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POTEM-5:3
3.1 lnc-POTEM-7:3
4.0 lnc-POTEM-7:3
4.1 lnc-POTEM-7:3
5.0 lnc-POTEM-7:3
5.1 lnc-TEP1-25:3
5.2 lnc-POTEG-7:4