Transcript: lnc-POTEM-2:30

Basic information

LNCipedia transcript ID: lnc-POTEM-2:30 
LNCipedia gene ID: lnc-POTEM-2
Location (hg19): chr14:19505896-19507493
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 386 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022416; NONHSAT035452
Alternative gene names: XLOC_010747; linc-POTEG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 46.8614 non-coding 
CPAT coding probability 4.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-POTEM-2:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POTEG-1:1
3.1 lnc-POTEG-2:2
4.0 lnc-POTEG-2:2
4.1 lnc-POTEG-2:2
5.0 lnc-POTEG-2:2
5.1 lnc-OR4K15-42:2
5.2 lnc-POTEM-2:30