Transcript: lnc-POTEM-4:10

Basic information

LNCipedia transcript ID: lnc-POTEM-4:10 
LNCipedia gene ID: lnc-POTEM-4
Location (hg19): chr14:19650060-19718379
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 686 bp
Exons: 9
Sources: NONCODE v4
Alternative transcript names: NONHSAT035478
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.016 non-coding 
CPAT coding probability 3.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POTEM-4:10 no no no no

Available literature

  1. Qiu (2015), Long non-coding RNA LINC01296 is a potential prognostic biomarker in patients with colorectal cancer., Tumour Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POTEG-4:19
4.0 lnc-POTEG-4:19
4.1 lnc-POTEG-4:19
5.0 lnc-POTEG-4:19
5.1 lnc-OR4K15-31:9
5.2 lnc-POTEM-4:10