Transcript: lnc-PPARA-10:3

Basic information

LNCipedia transcript ID: lnc-PPARA-10:3 
LNCipedia gene ID: lnc-PPARA-10
Location (hg19): chr22:46432037-46432830
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 794 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000057932.1|FTMT28800001458.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -34.9317 non-coding 
CPAT coding probability 6.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPARA-10:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP4-695O20__B.10.1-4:3
5.0 lnc-RP4-695O20__B.10.1-4:3
5.1 lnc-PPARA-7:3
5.2 lnc-PPARA-10:3