Transcript: lnc-PPARA-11:7

Basic information

LNCipedia transcript ID: lnc-PPARA-11:7 
LNCipedia gene ID: lnc-PPARA-11
Location (hg19): chr22:46409537-46411378
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1156 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273145.1|ENST00000608290.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -74.0026 non-coding 
CPAT coding probability 1.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPARA-11:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP4-695O20__B.10.1-1:7
5.0 lnc-RP4-695O20__B.10.1-1:7
5.1 lnc-PPARA-8:7
5.2 lnc-PPARA-11:7