Transcript: lnc-PPARGC1A-4:5

Basic information

LNCipedia transcript ID: lnc-PPARGC1A-4:5 
LNCipedia gene ID: lnc-PPARGC1A-4
Location (hg19): chr4:23877405-23886554
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 380 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT095790
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -160.6036 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPARGC1A-4:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHX15-4:4
4.0 lnc-PPARGC1A-4:5
4.1 lnc-PPARGC1A-4:5
5.0 lnc-PPARGC1A-4:5
5.1 lnc-AFAP1-116:4
5.2 lnc-PPARGC1A-4:5