Transcript: lnc-PPARGC1A-4:8

Basic information

LNCipedia transcript ID: lnc-PPARGC1A-4:8 
LNCipedia gene ID: lnc-PPARGC1A-4
Location (hg19): chr4:23882711-23883726
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 548 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT095792
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -82.8817 non-coding 
CPAT coding probability 1.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPARGC1A-4:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHX15-4:7
4.0 lnc-PPARGC1A-4:8
4.1 lnc-PPARGC1A-4:8
5.0 lnc-PPARGC1A-4:8
5.1 lnc-AFAP1-116:7
5.2 lnc-PPARGC1A-4:8