Transcript: lnc-PPDPFL-2:12

Basic information

LNCipedia transcript ID: lnc-PPDPFL-2:12 
LNCipedia gene ID: lnc-PPDPFL-2
Location (hg19): chr8:50137497-50142346
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1424 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014698; NONHSAT126511
Alternative gene names: XLOC_006794; linc-SNTG1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.516 non-coding 
CPAT coding probability 2.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPDPFL-2:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C8orf22-2:6
3.1 lnc-C8orf22-2:6
4.0 lnc-C8orf22-2:6
4.1 lnc-C8orf22-2:6
5.0 lnc-C8orf22-2:6
5.1 lnc-SDCBP-103:12
5.2 lnc-PPDPFL-2:12