Transcript: lnc-PPIAL4F-5:1

Basic information

LNCipedia transcript ID: lnc-PPIAL4F-5:1 
LNCipedia gene ID: lnc-PPIAL4F-5
Location (hg19): chr1:148864594-148865175
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 582 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT006151
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 68.9518 coding 
CPAT coding probability 22.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PPIAL4F-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NBPF20-6:1
4.0 lnc-NBPF20-6:1
4.1 lnc-NBPF20-6:1
5.0 lnc-NBPF20-6:1
5.1 lnc-FCGR1A-77:1
5.2 lnc-PPIAL4F-5:1