Transcript: lnc-PPIF-1:3

Basic information

LNCipedia transcript ID: lnc-PPIF-1:3 
LNCipedia gene ID: lnc-PPIF-1
Location (hg19): chr10:81142099-81145792
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1534 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT015106
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -136.8362 non-coding 
CPAT coding probability 22.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPIF-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPIF-1:3
4.0 lnc-PPIF-1:3
4.1 lnc-PPIF-1:3
5.0 lnc-PPIF-1:3
5.1 lnc-MTRNR2L5-238:3
5.2 lnc-PPIF-1:3