Transcript: lnc-PPIL2-8:1

Basic information

LNCipedia transcript ID: lnc-PPIL2-8:1 
LNCipedia gene ID: lnc-PPIL2-8
Location (hg19): chr22:22222084-22225778
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3695 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000057195.1|ENCT00000276906.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.6058 non-coding 
CPAT coding probability 0.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPIL2-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PPIL2-8:1
5.0 lnc-PPIL2-8:1
5.1 lnc-LRRC74B-22:1
5.2 lnc-PPIL2-8:1