Transcript: lnc-PPIP5K1-3:1

Basic information

LNCipedia transcript ID: lnc-PPIP5K1-3:1 
LNCipedia gene ID: lnc-PPIP5K1-3
Location (hg19): chr15:43784471-43785319
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 280 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT042085
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.5267 non-coding 
CPAT coding probability 39.37% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PPIP5K1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPIP5K1-3:1
4.0 lnc-PPIP5K1-3:1
4.1 lnc-PPIP5K1-3:1
5.0 lnc-PPIP5K1-3:1
5.1 lnc-LCMT2-4:1
5.2 lnc-PPIP5K1-3:1