Transcript: lnc-PPM1J-6:1

Basic information

LNCipedia transcript ID: lnc-PPM1J-6:1 
LNCipedia gene ID: lnc-PPM1J-6
Location (hg19): chr1:113247262-113249749
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 579 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT005278
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -90.4416 non-coding 
CPAT coding probability 14.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPM1J-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ST7L-6:1
4.0 lnc-ST7L-6:1
4.1 lnc-ST7L-6:1
5.0 lnc-ST7L-6:1
5.1 lnc-PHTF1-9:1
5.2 lnc-PPM1J-6:1