Transcript: lnc-PPM1M-2:6

Basic information

LNCipedia transcript ID: lnc-PPM1M-2:6 
LNCipedia gene ID: lnc-PPM1M-2
Location (hg19): chr3:52273271-52275113
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1101 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000243224.1|ENST00000464958.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -102.7823 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPM1M-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PPM1M-2:6
5.0 lnc-PPM1M-2:6
5.1 lnc-SPCS1-19:3
5.2 lnc-PPM1M-2:6