Transcript: lnc-PPP1R3A-5:1

Basic information

LNCipedia transcript ID: lnc-PPP1R3A-5:1 
LNCipedia gene ID: lnc-PPP1R3A-5
Location (hg19): chr7:113723958-113725770
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1693 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000096892.1|MICT00000331422.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -135.8995 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP1R3A-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PPP1R3A-5:1
5.0 lnc-PPP1R3A-5:1
5.1 lnc-TFEC-29:1
5.2 lnc-PPP1R3A-5:1