Transcript: lnc-PPP1R3B-11:4

Basic information

LNCipedia transcript ID: lnc-PPP1R3B-11:4 
LNCipedia gene ID: lnc-PPP1R3B-11
Location (hg19): chr8:9412656-9414048
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1393 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272267.1|ENST00000607598.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -119.9188 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP1R3B-11:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PPP1R3B-11:4
5.0 lnc-PPP1R3B-11:4
5.1 lnc-PINX1-37:1
5.2 lnc-PPP1R3B-11:4