Transcript: lnc-PPP2R2D-2:1

Basic information

LNCipedia transcript ID: lnc-PPP2R2D-2:1 
LNCipedia gene ID: lnc-PPP2R2D-2
Location (hg19): chr10:133821407-133824860
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 449 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018392; NONHSAT017062
Alternative gene names: XLOC_008674; linc-JAKMIP3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.2602 non-coding 
CPAT coding probability 1.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP2R2D-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PPP2R2D-2:1
3.1 lnc-PPP2R2D-2:1
4.0 lnc-PPP2R2D-2:1
4.1 lnc-PPP2R2D-2:1
5.0 lnc-PPP2R2D-2:1
5.1 lnc-MGMT-32:1
5.2 lnc-PPP2R2D-2:1