Transcript: lnc-PPP4R3B-4:2

Basic information

LNCipedia transcript ID: lnc-PPP4R3B-4:2 
LNCipedia gene ID: lnc-PPP4R3B-4
Location (hg19): chr2:55745033-55746556
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1524 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000048521.1|ENCT00000242325.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.5267 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP4R3B-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SMEK2-4:1
5.0 lnc-SMEK2-4:1
5.1 lnc-PPP4R3B-4:1
5.2 lnc-PPP4R3B-4:2