Transcript: lnc-PPP6C-1:1

Basic information

LNCipedia transcript ID: lnc-PPP6C-1:1 
LNCipedia gene ID: lnc-PPP6C-1
Location (hg19): chr9:127961813-127962755
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 373 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016868; NONHSAT134725
Alternative gene names: XLOC_007850; linc-PPP6C


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -121.573 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP6C-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PPP6C-1:1
3.1 lnc-PPP6C-1:1
4.0 lnc-PPP6C-1:1
4.1 lnc-PPP6C-1:1
5.0 lnc-PPP6C-1:1
5.1 lnc-ZBTB6-47:1
5.2 lnc-PPP6C-1:1