Transcript: lnc-PPY-2:1

Basic information

LNCipedia transcript ID: lnc-PPY-2:1 
LNCipedia gene ID: lnc-PPY-2
Location (hg19): chr17:41960387-41982957
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 592 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT053880
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -179.6848 non-coding 
CPAT coding probability 97.87% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PPY-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPY-2:1
4.0 lnc-PPY-2:1
4.1 lnc-PPY-2:1
5.0 lnc-PPY-2:1
5.1 lnc-GPATCH8-24:1
5.2 lnc-PPY-2:1