Transcript: lnc-PQLC1-17:5

Basic information

LNCipedia transcript ID: lnc-PQLC1-17:5 
LNCipedia gene ID: lnc-PQLC1-17
Location (hg19): chr18:76827698-76829022
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1325 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000038113.1|HBMT00000673440.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 35.5257 non-coding 
CPAT coding probability 8.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PQLC1-17:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC068473.1-17:2
5.0 lnc-AC068473.1-17:2
5.1 lnc-PQLC1-17:2
5.2 lnc-PQLC1-17:5