Transcript: lnc-PQLC1-5:2

Basic information

LNCipedia transcript ID: lnc-PQLC1-5:2 
LNCipedia gene ID: lnc-PQLC1-5
Location (hg19): chr18:76555715-76557244
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 868 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT060012
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 39.4055 non-coding 
CPAT coding probability 6.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PQLC1-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC068473.1-5:4
4.0 lnc-AC068473.1-5:4
4.1 lnc-AC068473.1-5:4
5.0 lnc-AC068473.1-5:4
5.1 lnc-PQLC1-6:1
5.2 lnc-PQLC1-5:2