Transcript: lnc-PRB1-1:8

Basic information

LNCipedia transcript ID: lnc-PRB1-1:8 
LNCipedia gene ID: lnc-PRB1-1
Location (hg19): chr12:11638989-11639612
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 213 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT026944; FPKM1_group_5781_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.2844 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRB1-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRB1-1:8
4.0 lnc-PRB1-1:8
4.1 lnc-PRB1-1:8
5.0 lnc-PRB1-1:8
5.1 lnc-M6PR-50:3
5.2 lnc-PRB1-1:8