Transcript: lnc-PRDM11-7:1

Basic information

LNCipedia transcript ID: lnc-PRDM11-7:1 
LNCipedia gene ID: lnc-PRDM11-7
Location (hg19): chr11:45333589-45334771
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 390 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_469_chr11:45333588-45334771_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.7642 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRDM11-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRDM11-7:1
4.0 lnc-PRDM11-7:1
4.1 lnc-PRDM11-7:1
5.0 lnc-PRDM11-7:1
5.1 lnc-OR5L2-93:1
5.2 lnc-PRDM11-7:1