Transcript: lnc-PRDM9-14:7

Basic information

LNCipedia transcript ID: lnc-PRDM9-14:7 
LNCipedia gene ID: lnc-PRDM9-14
Location (hg19): chr5:21565130-21586320
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 757 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT100717
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.1679 non-coding 
CPAT coding probability 9.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRDM9-14:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRDM9-14:7
4.0 lnc-PRDM9-14:7
4.1 lnc-PRDM9-14:7
5.0 lnc-PRDM9-14:7
5.1 lnc-CARD6-173:1
5.2 lnc-PRDM9-14:7