Transcript: lnc-PREPL-3:5

Basic information

LNCipedia transcript ID: lnc-PREPL-3:5 
LNCipedia gene ID: lnc-PREPL-3
Location (hg19): chr2:44391587-44395533
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3274 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273106.1|ENCT00000241452.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.2401 non-coding 
CPAT coding probability 2.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PREPL-3:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PREPL-3:5
5.0 lnc-PREPL-3:5
5.1 lnc-ATP6V1E2-27:3
5.2 lnc-PREPL-3:5