Transcript: lnc-PRIMPOL-6:1

Basic information

LNCipedia transcript ID: lnc-PRIMPOL-6:1 
LNCipedia gene ID: lnc-PRIMPOL-6
Location (hg19): chr4:185747327-185750135
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2809 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000071354.1|FTMT21600011837.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.9061 non-coding 
CPAT coding probability 11.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRIMPOL-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-701P16.2.1-1:5
5.0 lnc-RP11-701P16.2.1-1:5
5.1 lnc-FAM149A-24:1
5.2 lnc-PRIMPOL-6:1