Transcript: lnc-PRIMPOL-6:2

Basic information

LNCipedia transcript ID: lnc-PRIMPOL-6:2 
LNCipedia gene ID: lnc-PRIMPOL-6
Location (hg19): chr4:185747327-185765799
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1646 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000071354.1|MICT00000275641.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.0398 non-coding 
CPAT coding probability 12.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRIMPOL-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-701P16.2.1-1:6
5.0 lnc-RP11-701P16.2.1-1:6
5.1 lnc-FAM149A-24:2
5.2 lnc-PRIMPOL-6:2