Transcript: lnc-PRKN-21:8

Basic information

LNCipedia transcript ID: lnc-PRKN-21:8 
LNCipedia gene ID: lnc-PRKN-21
Location (hg19): chr6:163757090-163767614
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7888 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000090770.1|MICT00000314867.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.1927 non-coding 
CPAT coding probability 19.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRKN-21:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AL078585.1-21:4
5.0 lnc-AL078585.1-21:4
5.1 lnc-PRKN-21:2
5.2 lnc-PRKN-21:8