Transcript: lnc-PRKX-10:1

Basic information

LNCipedia transcript ID: lnc-PRKX-10:1 
LNCipedia gene ID: lnc-PRKX-10
Location (hg19): chrX:3841762-3844754
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2993 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1880:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.5528 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRKX-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-706O15.1.1-10:1
4.1 lnc-RP11-706O15.1.1-10:1
5.0 lnc-RP11-706O15.1.1-10:1
5.1 lnc-PCSK1N-250:1
5.2 lnc-PRKX-10:1