Transcript: lnc-PRL-3:5

Basic information

LNCipedia transcript ID: lnc-PRL-3:5 
LNCipedia gene ID: lnc-PRL-3
RefSeq ID: NR_134614
Location (hg19): chr6:22643739-22718153
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 758 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134614.1
Alternative gene names: LOC105374972


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.6497 non-coding 
CPAT coding probability 3.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRL-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-C6orf62-54:2
5.1 lnc-C6orf62-54:2
5.2 lnc-PRL-3:5