Transcript: lnc-PRL-7:2

Basic information

LNCipedia transcript ID: lnc-PRL-7:2 
LNCipedia gene ID: lnc-PRL-7
Ensembl Gene ID: ENSG00000233358
Ensembl Transcript ID: ENST00000420572
Location (hg19): chr6:22744624-23032009
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 871 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT108084; ENST00000420572.2
Alternative gene names: ENSG00000233358.2; RP1-209A6.1; AL035401.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.2589 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRL-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRL-7:2
4.0 lnc-PRL-7:2
4.1 lnc-PRL-7:2
5.0 lnc-PRL-7:2
5.1 lnc-C6orf62-51:7
5.2 lnc-PRL-7:2