Transcript: lnc-PRL-7:4

Basic information

LNCipedia transcript ID: lnc-PRL-7:4 
LNCipedia gene ID: lnc-PRL-7
Location (hg19): chr6:23169583-23177266
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6110 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000087736.1|ENCT00000382672.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.6403 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRL-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PRL-7:4
5.0 lnc-PRL-7:4
5.1 lnc-C6orf62-51:5
5.2 lnc-PRL-7:4