Transcript: lnc-PRM1-6:1

Basic information

LNCipedia transcript ID: lnc-PRM1-6:1 
LNCipedia gene ID: lnc-PRM1-6
Location (hg19): chr16:11501179-11511667
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 557 bp
Exons: 5
Sources: Broad Institute
Alternative transcript names: TCONS_00024581
Alternative gene names: XLOC_011876; linc-PRM1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -753.0058 non-coding 
CPAT coding probability 97.94% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PRM1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC099489.1-1:1
3.1 lnc-AC099489.1-1:1
4.0 lnc-AC099489.1-1:1
4.1 lnc-AC099489.1-1:1
5.0 lnc-AC099489.1-1:1
5.1 lnc-PARN-54:1
5.2 lnc-PRM1-6:1