Transcript: lnc-PROP1-1:1

Basic information

LNCipedia transcript ID: lnc-PROP1-1:1 
LNCipedia gene ID: lnc-PROP1-1
Location (hg19): chr5:177433441-177446907
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 493 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000535495; NONHSAT105497
Alternative gene names: ENSG00000255684; AC136940.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.487 non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PROP1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PROP1-1:1
3.1 lnc-PROP1-1:1
4.0 lnc-PROP1-1:1
4.1 lnc-PROP1-1:1
5.0 lnc-PROP1-1:1
5.1 lnc-PDLIM7-26:1
5.2 lnc-PROP1-1:1