Transcript: lnc-PRPS1-3:3

Basic information

LNCipedia transcript ID: lnc-PRPS1-3:3 
LNCipedia gene ID: lnc-PRPS1-3
Location (hg19): chrX:106916430-106917197
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 768 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000112061.1|FTMT29200004676.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -84.082 non-coding 
CPAT coding probability 2.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRPS1-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PRPS1-3:3
5.0 lnc-PRPS1-3:3
5.1 lnc-TEX13C-210:3
5.2 lnc-PRPS1-3:3