Transcript: lnc-PRR15-3:1

Basic information

LNCipedia transcript ID: lnc-PRR15-3:1 
LNCipedia gene ID: lnc-PRR15-3
Location (hg19): chr7:29652066-29654591
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2513 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3391_chr7:29652065-29654591_colon
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.7636 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRR15-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRR15-3:1
4.0 lnc-PRR15-3:1
4.1 lnc-PRR15-3:1
5.0 lnc-PRR15-3:1
5.1 lnc-MTURN-20:1
5.2 lnc-PRR15-3:1