Transcript: lnc-PRR26-3:1

Basic information

LNCipedia transcript ID: lnc-PRR26-3:1 
LNCipedia gene ID: lnc-PRR26-3
Location (hg19): chr10:736183-737679
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 507 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT010870; FPKM1_group_2750_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.7743 non-coding 
CPAT coding probability 11.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRR26-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf108-3:2
4.0 lnc-C10orf108-3:2
4.1 lnc-C10orf108-3:2
5.0 lnc-C10orf108-3:2
5.1 lnc-NPY4R2-554:1
5.2 lnc-PRR26-3:1