Transcript: lnc-PRY-1:4

Basic information

LNCipedia transcript ID: lnc-PRY-1:4 
LNCipedia gene ID: lnc-PRY-1
Location (hg19): chrY:24585740-24587584
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 470 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017579; NONHSAT139684
Alternative gene names: XLOC_008300; linc-PRY


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.9261 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRY-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRY-1:2
3.1 lnc-RBMY1J-1:2
4.0 lnc-PRY-1:4
4.1 lnc-PRY-1:4
5.0 lnc-PRY-1:4
5.1 lnc-PRY-1:4
5.2 lnc-PRY-1:4