Transcript: lnc-PSD3-1:11

Basic information

LNCipedia transcript ID: lnc-PSD3-1:11 
LNCipedia gene ID: lnc-PSD3-1
Location (hg19): chr8:19041184-19093131
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 667 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253557.1|ENST00000518417.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -343.8323 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PSD3-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PSD3-1:11
5.0 lnc-PSD3-1:11
5.1 lnc-EGR3-36:10
5.2 lnc-PSD3-1:11