Transcript: lnc-PSEN2-7:4

Basic information

LNCipedia transcript ID: lnc-PSEN2-7:4 
LNCipedia gene ID: lnc-PSEN2-7
Location (hg19): chr1:227015439-227021605
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 825 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000037912.1|MICT00000031899.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 29.4538 non-coding 
CPAT coding probability 12.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PSEN2-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PSEN2-7:4
5.0 lnc-PSEN2-7:4
5.1 lnc-ZNF678-30:4
5.2 lnc-PSEN2-7:4