Transcript: lnc-PSMA1-2:6

Basic information

LNCipedia transcript ID: lnc-PSMA1-2:6 
LNCipedia gene ID: lnc-PSMA1-2
Location (hg19): chr11:14532460-14535839
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 645 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT018133
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -270.0336 non-coding 
CPAT coding probability 2.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PSMA1-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COPB1-2:5
4.0 lnc-RP11-140L24.4.1-2:5
4.1 lnc-RP11-140L24.4.1-2:5
5.0 lnc-RP11-140L24.4.1-2:5
5.1 lnc-COPB1-2:11
5.2 lnc-PSMA1-2:6