Transcript: lnc-PSMB9-6:13

Basic information

LNCipedia transcript ID: lnc-PSMB9-6:13 
LNCipedia gene ID: lnc-PSMB9-6
Location (hg19): chr6:32862537-32872745
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4217 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000083589.1|FTMT22300001464.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.6819 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PSMB9-6:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PSMB9-6:13
5.0 lnc-PSMB9-6:13
5.1 lnc-TNF-76:14
5.2 lnc-PSMB9-6:13