Transcript: lnc-PSMB9-6:3

Basic information

LNCipedia transcript ID: lnc-PSMB9-6:3 
LNCipedia gene ID: lnc-PSMB9-6
RefSeq ID: NR_037177
Location (hg19): chr6:32861953-32871535
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3690 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT108945; NR_037177; NR_037177.1
Alternative gene names: LOC100294145


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.6819 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PSMB9-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PSMB9-6:3
4.0 lnc-PSMB9-6:3
4.1 lnc-PSMB9-6:3
5.0 lnc-PSMB9-6:3
5.1 lnc-TNF-76:6
5.2 lnc-PSMB9-6:3