Transcript: lnc-PSMD5-5:1

Basic information

LNCipedia transcript ID: lnc-PSMD5-5:1 
LNCipedia gene ID: lnc-PSMD5-5
Location (hg19): chr9:123626357-123631142
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 578 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT134538
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 498.9121 coding 
CPAT coding probability 55.31% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PSMD5-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PSMD5-2:2
4.0 lnc-PSMD5-5:1
4.1 lnc-PSMD5-5:1
5.0 lnc-PSMD5-5:1
5.1 lnc-TTLL11-15:1
5.2 lnc-PSMD5-5:1